BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005B05SP1|AL425331
(898 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1781 1657 0.0
>3x_Contig1781
Length = 20717
Score = 1657 bits (831), Expect = 0.0
Identities = 877/898 (97%), Gaps = 3/898 (0%)
Strand = Plus / Plus
Query: 1 acgattacgggttcttaatcaacaggctcatgaacacaaacatgcccaacaacaaagagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6501 acgattacgggttcttaatcaacaggctcatgaacacaaacatgcccaacaacaaagagg 6560
Query: 61 acttcgaatggtgggttcagaaatacawaccaacgtcgtacgatttgaacctaattaaca 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 6561 acttcgaatggtgggttcagaaatacataccaacgtcgtacgatttgaacctaattaaca 6620
Query: 121 agttagttcatgaggtaacgcaacaacacccacatccaccaccattacatctattacaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6621 agttagttcatgaggtaacgcaacaacacccacatccaccaccattacatctattacaaa 6680
Query: 181 gtcaacagcaacagcaamaaaaccaacaacagcaatatacactagaactactggctgacg 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6681 gtcaacagcaacagcaacaaaaccaacaacagcaatatacactagaactactggctgacg 6740
Query: 241 agttggggattccgatcttcccattgttcagcagcgcaggngnacaaagtctcttggcac 300
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 6741 agttggggattccgatcttcccattgttcagcagcgcagcgggacaaagtctcttggcac 6800
Query: 301 tattggcatacacccaactcggtaaattgtctttgtacaaactacgcaatggaacagatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6801 tattggcatacacccaactcggtaaattgtctttgtacaaactacgcaatggaacagatt 6860
Query: 361 tcagttactacaagaacctgatctacggaatcacacaggagtmatatatgtgatttttat 420
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 6861 tcagttactacaagaacctgatctacggaatcacacaggagtaatatatgtgatttttat 6920
Query: 421 gtgccagcctttcatatagagtatcatcaaaaaatagacatttatgtatgtgaatatata 480
|||||||||||||||||||||||||||||| | | ||||||||||||||||||||||
Sbjct: 6921 gtgccagcctttcatatagagtatcatcaata---atgcatttatgtatgtgaatatata 6977
Query: 481 tatatacmtacacaatcattcttaaaatagggtataamaggtggctgactagccacgtnc 540
||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 6978 tatatacatacacaatcattcttaaaatagggtataaaaggtggctgactagccaccgtc 7037
Query: 541 actgaactgaactgatgctgaccagtgcgaaacccacaggttgcmagagcgcaacctgtg 600
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 7038 actgaactgaactgatgctgaccagtgcgaaacccacaggttgcaagagcgcaacctgtg 7097
Query: 601 tacttcattcacctggcatctcgtgaggcatgatttcataagatgattgamgagttttcc 660
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 7098 tacttcattcacctggcatctcgtgaggcatgatttcataagatgattgacgagttttcc 7157
Query: 661 attaaaaaattttgaaaattgactctttacatataatcactagatgcaaacatgcacata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7158 attaaaaaattttgaaaattgactctttacatataatcactagatgcaaacatgcacata 7217
Query: 721 ctttgcttgtgaggggcgtttcttgttgttagggtgtctatttggttcgcttatcggttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7218 ctttgcttgtgaggggcgtttcttgttgttagggtgtctatttggttcgcttatcggttt 7277
Query: 781 tcatgcattcattagaaaccagactttaatctttagcgataagtttgaagcgtgaggcac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7278 tcatgcattcattagaaaccagactttaatctttagcgataagtttgaagcgtgaggcac 7337
Query: 841 atatacggtgttcgtagtgctgaaatttcccgtgagtctgggaaaaarcacccatagg 898
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 7338 atatacggtgttcgtagtgctgaaatttcccgtgagtctggaaaaaagcacccatagg 7395
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8549
Number of Sequences: 1807
Number of extensions: 8549
Number of successful extensions: 142
Number of sequences better than 1.0e-20: 1
length of query: 898
length of database: 10,358,551
effective HSP length: 16
effective length of query: 882
effective length of database: 10,329,639
effective search space: 9110741598
effective search space used: 9110741598
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)